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Defining BioInformatics
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This contains information about universities that are offering bioinformatics degree programs.
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Contains information about bioinformatics resources including databases, tools and techniques.
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Home » 2011 » August » 11 » Generalized DNA, protein and carbohydrate databases
2:11 PM Generalized DNA, protein and carbohydrate databases |
Generalized DNA, protein and carbohydrate databases
- Primary sequence databases
- EMBL (European Molecular Biology Laboratory nucleotide sequence database at EBI, Hinxton, UK)
- GenBank (at National Center for Biotechnology information, NCBI, Bethesda, MD, USA)
- DDBJ (DNA Data Bank Japan at CIB , Mishima, Japan)
- Protein sequence databases
- SWISS-PROT (Swiss Institute of Bioinformatics, SIB, Geneva, CH)
- TrEMBL (=Translated EMBL: computer annotated protein sequence database at EBI, UK)
- PIR-PSD (PIR-International Protein Sequence Database, annotated protein database by PIR, MIPS and JIPID at NBRF, Georgetown University, USA)
- UniProt (Joined data from Swiss-Prot, TrEMBL and PIR)
- UniRef (UniProt NREF (Non-redundant REFerence) database at EBI, UK)
- IPI (International Protein Index; human, rat and mouse proteome database at EBI, UK)
- Carbohydrate databases
- CarbBank (Former complex carbohydrate structure database, CCSD, discontinued!)
- 3D structure databases
- PDB (Protein Data Bank cured by RCSB, USA)
- EBI-MSD (Macromolecular Structure Database at EBI, UK )
- NDB (Nucleic Acid structure Datatabase at Rutgers State University of New Jersey , USA)
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